I did a quick search in the SOLIDWORKS Knowledge Base for the terms hydrophobic/hydrophilic and there were no results. I have not seen any other company attempt this so I do not know if there is a workaround for it but it does not look like this software accounts for this sort of aversion/attraction at the fluid/solid interface.
Thanks for checking. I'm also not sure this has been done before (which is somewhat surprising) but I thought I would shoot it out to the forum anyway and see what came out on the other end. If you ever come across anything, please let me know!